Since Cap's add more resistance and are not a power supply source, they are actually a negative. Less volts end up going to the amplifer as a result when using a cap. The higher the farad's the greater the resistance.
The resistance is a little higher and it is a power draw. The theory behind the caps is that during "normal" play you don't have enough load for this little extra to matter. When the "heavy" load hits the cap provides a microsecond of stored energy and rides you through the rough spots. This would work well if you :
1. actually need it.
2. Have enough cap to ride you through the rough spot. This is the biggest problem. The caps on the market that people use don't provide enough stored energy to get you through the rough spots. Bass usually lasts longer than the microsecond or two that the cap can provide. Once the cap is discharged it is now an additional load to the system and can put more strain on a system that is already overloaded. This amplifies the "clipping" effect.
3. Just like the bling bling factor.
Other than that they are a waste of money unless you want to put enough of them in your trunk to affect the fuel economy of your vehicle. I haven't done the math but I would almost bet that if you actually put enough caps in the system to ride through the highest 2% of the current draw in order to ride through the rough spots the recharging current would make draw the system below what is needed for "normal power". So if you wanted to run the enough caps to work you would have to upgrade your charging system to recharge the capacitors, at which time your charging system is probably big enough to handle the peaks.